PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT32264
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family MYB_related
Protein Properties Length: 231aa    MW: 24648 Da    PI: 5.5529
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT32264genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding346.6e-11841135
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgR 35
                     rg+W++eEd  l ++v+++G ++W++I r ++ gR
         EMT32264  8 RGPWSPEEDGTLRRLVERHGARNWTAIGRGVP-GR 41
                     89******************************.98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS512949.744150IPR017930Myb domain
SuperFamilySSF466891.64E-8342IPR009057Homeodomain-like
PfamPF002491.6E-9841IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.602.0E-10842IPR009057Homeodomain-like
CDDcd001674.99E-81041No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    Send to blast
MEGCDRIRGP WSPEEDGTLR RLVERHGARN WTAIGRGVPG RLGDLGADGV AEGELEERPC  60
KRASVTPEST SGSGSGSWSD RSDLSHGGAF GLGQVYRPVA RAGGFEPADC AMSQRHEEEE  120
QQQEDPFTSL SLSLPGTDAH GFHHDGSHSH FHQPSLSSSP PPAPASSTAP PTSSYPFSPE  180
FAALMQEMIR DEVRRYISGV NCGANLPSMP QLVDGVMRAA AERAGGVSRT R
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004965791.16e-56PREDICTED: transcription factor MYB44-like
TrEMBLM8CD241e-168M8CD24_AEGTA; Transcription factor MYB44
STRINGMLOC_63964.19e-91(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP78938154
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G67300.16e-13myb domain protein r1